| |
Improving validity of on-farm research
Lee J. Johnston, PhD; Antonio Renteria, DVM, PhD; Michael R. Hannon, DVM, PhD
LJJ: West Central Research and Outreach Center, University of Minnesota, Morris,
Minnesota;
AR: CENIFMA-INIFAP-SAGARPA, Mexico;
MRH: Buffalo, Minnesota. Corresponding author: Dr Lee J. Johnston, University
of Minnesota, West Central Research and Outreach Center, 46352 State Hwy 329,
Morris, MN 56267; Tel: 320-589-1711; Fax:
320-589-4870; E-mail: johnstlj@mrs.umn.edu.
Cite as: Johnston LJ, Renteria A, Hannon MR. Improving validity of
on-farm research.
J Swine Health Prod. 2003;11(5):240-246.
Also available as a PDF.
Summary
On-farm research receives much attention from swine producers and industry
professionals, and is often perceived by pork producers to be more relevant to
real-world commercial pork production than controlled experiments conducted in
university settings. Swine producers and industry
professionals must realize that retrospective analysis can identify associations
among variables of interest but provides no evidence for a causal relationship between
a manipulated variable(s) and a production response. As substantial commitments
of time and resources are required for a properly conducted experiment,
producers should give careful consideration to
undertaking on-farm research. To generate useful information in on-farm experiments,
one must adhere to principles of scientific inquiry; maintain integrity of the
production system; willingly commit labor and
financial resources; and pay attention to details. Effective communications with farm
owners, barn workers, and other decision makers are crucial. Advice of a statistician
on experimental design and statistical analysis of data, before initiating the study,
helps ensure conclusions are valid and defensible. Ideas to enhance the success of
on-farm research are presented.
Keywords: swine, experimental design, research methodology
Search the AASV web site for pages with similar keywords.
Received: November 22, 2002
Accepted: January 3, 2003
Approaches to pork production research
Livestock producers aspire to achieve a more thorough understanding of the
biology of their production system so that they can manage that system with optimal
efficiency. A wealth of data collected under a variety of conditions is required to gain
a full understanding of a swine production system. Data may be collected
under tightly controlled conditions at
universities or research institutes, in controlled
studies conducted at production units (on-farm research), and through retrospective
analysis of commercial production records. Testimonials from practitioners in
commercial production settings may provide some information about a production system.
Each of these approaches possesses inherent strengths and weaknesses.
Data collected at universities and research institutes
Experiments conducted at universities and research institutes have the primary
advantage of strict control over most variables that might affect the outcome of the
experiment. Generally, these experiments are designed to produce precise results that
answer questions about how and why a particular treatment elicits an observed
response.1 This high degree of control
allows the investigator to gain confidence that
the observed responses are attributable to the treatments imposed and not due to
unseen differences (confounding variables) between the control and treated animals.
Confounding variables, such as characteristics of
the population being studied (eg, genetic line, age, health status, nutritional history)
and the environment in which the experiment is conducted (eg, ventilation rate, pen or
crate design, season, geographical location) are tightly controlled so that the only
differences between control and treated animals are the imposed treatments. As strict
control of experimental conditions is very costly,
the experiment usually involves a relatively small number of animals. In addition, tight
control of confounding variables creates a somewhat "artificial" situation that may not
reflect commercial production systems where the results will be applied.
On-farm research (field trials)
On-farm trials or field trials are conducted at farms involved in commercial
production. One can easily argue that this setting provides the true test of whether a
management practice or treatment has any utility, because commercial farms offer
production conditions that are not present in
animal facilities of universities or research
institutes.2 While university research
determines how and why a technology works, on-farm research focuses primarily
on which technology should be applied under practical conditions, and what results
may be expected.1 On-farm trials allow one
to evaluate the efficacy of a new technology in a specific production system. One
may conclude that if the intervention works under field conditions, with all the
inherent variation present in the system, then the intervention truly is efficacious.
This conclusion may be accepted only if one is fairly certain that coincident changes
in confounding variables are not responsible for the observed response. For instance,
if the performance of a new feeder for lactating sows is compared to that of
existing feeders in the farrowing quarters and
determined to be superior, one could easily conclude that the design of the new feeder
is better suited for lactating sows than the existing feeder. In reality, the new
feeder may not be a better design. The new feeder simply may be operating properly
because it is new, and the existing feeders are
old, worn, and not working properly. In this instance, maintenance of the
existing feeder may have a larger influence on selecting the superior feeder than design
of the feeder.
Retrospective analysis
Retrospective analysis of commercial production data may provide a useful tool
to gain some insight into relationships among production variables. Large numbers
of observations made during extended periods of time are characteristic of this type
of analysis. The investigator cannot control confounding variables and may have
limited information to adjust for these confounders in the statistical analysis.
Retrospective analysis may identify associations among variables of interest, but
provides no evidence for a causal relationship between one or more manipulated
variables and a production response. Nonetheless, apparent relationships identified
among production variables in retrospective analyses may be tested using carefully
designed prospective treatments imposed in controlled university or on-farm experiments.
Statistical process control
Statistical process control (SPC) is an approach to the analysis of data collected
on farms, which allocates total variation associated with a production process to
common causes and special causes. Common causes are innate to the process and are
always present. Special causes are occasional
disturbances to the process that appear in a somewhat unpredictable manner. Limits to
the variation around a central mean are calculated for each production process on
the basis of sample size, overall mean for the process, and the average range of
observations.3 Variation within these calculated
limits is considered normal and not a cause for intervention in the production
process, while variation outside these limits
suggests that the production process is out of
control and some intervention is warranted.
Results of SPC analysis are presented in chart
form to graphically depict variation in a process. Statistical process control charts have
been used widely in the manufacturing sector to detect variation in production processes
or products. Several authors have argued that use of SPC charts may be a valuable tool
in monitoring swine production
systems.4,5 However, quantitative evaluation of
SPC procedures in livestock production systems has not been
reported.6 A thorough understanding of SPC
procedures7 and large numbers of observations are critical to
extract value from SPC approaches.
Testimonials
Testimonials provided by swine practi-tioners or swine producers are
evaluations of a technology or intervention based
on unstructured observations rather than controlled experimentation. Testimonials
may help identify interesting areas for future research, but they are clouded by
personal biases of the observers, and should not
be used as a basis for decision making in a swine production system. If similar
observations are reported in a variety of production systems, one may design a
controlled experiment to determine whether the perceived cause-and-effect relationship is real.
Guiding principles for valid on-farm experiments
Pork producers and industry professionals seem to have an intense interest in
on-farm research. This interest seemingly stems from the fact that experiments are
conducted in their facilities, so the results are tailored to their production system.
Furthermore, tangible results are generated that producers can see and experience
personally. The central question is, "Are the results valid?"
There is a dearth of published information to guide swine veterinarians and other
consultants in the conduct of on-farm experiments.
Edwards-Jones8 discussed the merits of on-farm research in developed
countries, such as the United Kingdom, from a societal viewpoint, but provided little
direction on how to conduct trials on commercial farms. Several
authors1,9,10 provided a stepwise guide to conducting on-farm
research in developing third-world countries. The vast differences in culture,
resources, production systems, and technical
expertise between producers in developing
countries and producers utilizing
capital-intensive, technologically advanced production
systems limits seamless adoption of the approaches suggested by these authors.
However, some fundamental principles of on-farm research are transferable to
modern production systems and will be presented below.
Adhere to principles of scientific inquiry
The primary objective of on-farm research is to obtain, in a commercial
production setting, a valid, defensible answer to
the question being studied. To achieve a valid answer, one must adhere to basic
principles of scientific inquiry. A full discussion
of these principles is beyond the scope of this paper. The reader is referred to other
authors for a more complete discussion of these basic
principles.11,12
Experimental unit. The investigator must select the proper experimental unit,
which is defined as the smallest entity to which one application of a treatment is
applied.13 In swine production facilities,
experimental units might be individual sows in
stalls, pens of pigs, animals in a room within a barn, or animals in a barn. An
individual sow housed in a stall may be an
experimental unit, because one sow may receive the control treatment while an adjacent
sow receives the experimental treatment. When sows are housed in groups, a pen of
sows may be the experimental unit. In most experiments conducted with nursery,
growing, or finishing pigs within one room or barn, pen is the experimental unit,
because all pigs in the pen are exposed to the
same treatment. However, two adjacent pens that share a fenceline feeder constitute
only one experimental unit for a nutrition experiment, because all pigs in both pens
are exposed to the same treatment.
Coefficient of variation. The coefficient
of variation (CV) provides a measure of inherent variation in a trait and is expressed as
a percentage. The CV for a trait is calculated by dividing the standard deviation of
the treatment mean by the treatment mean, and then multiplying the result by
100.14 The CV measures the unexplained
variation that occurs among experimental units that are treated alike. This is referred to
as experimental error. High CVs make treatment differences difficult to detect,
while low CVs make it easier to detect treatment differences.
Sample size. Statistical procedures are available to calculate the minimum
sample size necessary to produce a reliable result with the desired sensitivity. This defines
the power of the experiment. Sample size calculations are unwieldy for those
inexperienced with their use.
Berndtson15 simplified use of sample size calculations
by developing a series of tables in which sample size is based on the CV for the
trait of interest and the magnitude of difference one hopes to detect (Table 1). Sample
size calculators are also available on the worldwide
web.16, 17
The size of an experiment (number of replicates) is dictated by the CV for the
response variable(s) of interest, the alpha level
([alpha]) selected by the experimenter, and the desired power of the
experiment. As the CV for a response variable increases, and
the level of [alpha] and desired power of the experiment remain
constant, the number of replicates required to detect a statistically significant
difference among treatments increases. Exercising control over confounding factors
decreases the CV and allows experiments to be smaller but powerful.
Scientific inquiry is grounded on the development of two hypotheses: the null
hypothesis (H0) and an alternate
hypothesis (HA). The H0 assumes that no difference
in the response variable(s) is caused by the imposed treatments. The
HA states that the imposed treatments did elicit a
difference in the response variable(s). Once the
appropriate hypotheses are established, investigators select the
[alpha] level they will use to evaluate the results. The
[alpha] level is a measure of the probability that the
H0 will be rejected (ie, treatments are
different) when in truth there is no difference among
treatments. Incorrect rejection of the H0
is called a Type I error. An [alpha] level of 0.05
(P <.05) indicates that there is less than a 5% or one in 20 chance that
a Type I error will be committed, or, conversely, that the
H0 will be accepted correctly 95% of the time. Acceptance of
the H0 means that there is insufficient
evidence for a difference among treatments. Accepting the
H0 does not allow one to state with confidence that there is no
difference among treatments. An [alpha] level of 0.10
(P <.10) means that the investigator will be wrong in believing that
treatments did affect the response variables in one
of 10 experiments, but will be correct 90% of the time.
The power of the experiment is determined by the probability that the investigator
will incorrectly accept the H0 (ie, not detect
a true treatment difference). This is a Type II error. The acceptable Type II error
rate, designated as [beta], is often set at 0.20, which means that a true difference in
treatments will not be detected 20% of the time. However, the investigator will
accurately detect a difference (ie, accept the
HA) 80% of the time. The ability to
accurately detect differences is considered the power of the experiment (1 -
[beta]).
The selection of a proper [alpha] level is a matter of much discussion among
scientists and people who implement scientific
findings in commercial production. An [alpha] level of 0.05 is widely accepted among
scientists because it provides great confidence that the investigator will not
mistakenly make claims about the effectiveness of
a treatment. This is a conservative approach common among scientists. However,
producers and practitioners working under commercial conditions may find a Type
I error rate of 10% or 15% acceptable, especially if the cost of mistakenly adopting
a technology is low. Decreasing the acceptable
[alpha] level increases one's confidence that detected differences are real,
but makes statistically significant differences more infrequent. Decreasing
[beta] increases the power of the experiment,
which requires increases in the number of replications, assuming that the CV stays
constant. Increasing the power of an experiment increases the size of the experiment.
Replicates. Treatments must be
replicated or repeatedly assigned to similar
experimental units in sufficient quantity to
assure a reliable result. In general, more replication is better than less; however, there is
a practical limit to the capital and human resources that can be committed to an
experiment. To determine the appropriate number of replications for each
treatment, one derives an estimate of the CV for
the trait of interest from previously reported research conducted by other
investigators under conditions similar to those in
the proposed experiment. The most valuable CV is one calculated from data
collected under conditions the same as those in
the proposed experiment (eg, genetics, housing, health status, nutrition). If the
estimated CV and the magnitude of difference one would like to detect are known,
one may refer to Table 1 to determine the numberof replicates necessary for
adequate statistical power to detect treatment
differences. For example, assume that the researchers would like to detect an increase
in litter size from 9.5 to 10 pigs per litter at weaning, a 5% improvement. If the
CV equals 10%, 63 sows per treatment, or 126 sows for an experiment with two
treatments, will be required. However, if the CV is 20%, 252 sows per treatment will
be required. The recommendations listed in Table 1 assume that the investigators
accept a Type I error rate of less than 5% and a Type II error rate of less than 20%.
Accurate estimation of the CV is central to proper use of Table 1. Investigators
involved in on-farm research may or may not have easy access to CVs for many traits
of interest. Coefficients of variation for some traits of interest in on-farm research
are presented in Table 2, but on-farm researchers should determine CVs for their
own production systems. The CVs presented in Table 2 were derived from a random
selection of reports recently published in the Journal of Animal
Science. This information is intended as a general reference, not as
a substitute for determining CVs that more closely reflect the conditions of a trial
being designed for a specific production system.
Berndtson15 provides a complete discussion of the issues surrounding proper
selection of the CV for use in Table 1.
Randomization. Treatments must be assigned randomly to experimental
units. Randomization ensures that all experimental units have an equal chance of being
assigned to any of the available
treatments.11 Randomization is the principle that
workers in commercial units most often compromise in the interest of convenience
and ease of implementing the experimental protocol. For instance, randomly
selecting one row or section of gestation crates
to house control sows and another row or section of crates for treated sows is not
true randomization. One row may be nearer air inlets or cold outside walls or at the end
of a feed line, which could create a different environment and potentially a
differential response to the imposed treatments.
While this approach may make record-keeping easier, reduce the chances of
misapplying treatments, and improve labor
efficiency, the potential for confounded results is
also high, which subverts the primary goal of the experiment.
Random allocation of experimental units to treatments should be completed
before the investigator sees animals that will be assigned to the experiment. The best
way to accomplish this is for the experimenter to know which experimental units (eg,
gestation stalls, farrowing stalls, nursery pens, farrowing rooms) will be available for
the experiment and to assign a number to each available experimental unit. The number
of each unit is written on a piece of paper, all of the numbers are placed in a
container, and the researcher mixes them up and draws a number that is assigned to the
first treatment. The second number drawn is assigned to the next treatment, and so
on. The procedure continues until all the experimental units have been assigned
to treatments. This procedure is simple, but is time consuming when large numbers
of experimental units are involved. Alternatively, one can use the random
number generator (RANDBETWEEN function) of Excel (Microsoft Corporation,
Redmond, Washington) to randomly assign a treatment number to the experimental
units that have been entered into the spread-sheet.
Maintain integrity of the commercial production system
The main reason for conducting on-farm research is to determine the response
of animals housed and managed in commercial production systems. Consequently,
the characteristics of the production system must be maintained to achieve this
objective. Investigators must attempt to control as many confounding variables as
possible to ensure a valid test of the technology
or hypothesis being evaluated. However, if the character of the production system is
lost in this quest for maximal control, one has created a controlled set of conditions
similar to a university setting, and the experiment no longer meets the
"on-farm" objective.
For example, assume a researcher wants to evaluate a new method for insemination
of sows. Since the goal is to know if this new method has any chance of working,
the best inseminator on the farm is selected to mate every other sow using the new
procedure. Only data from sows mated by this superior technician will be considered
in the experiment. This experiment can provide a reliable conclusion about
whether the new method is efficacious. However, the researcher's approach does not
evaluate whether the new method is efficacious under commercial conditions. In a
normal commercial setting, several different
people with differing abilities will be mating
sows. In this example, the researcher's desire to control all confounding variables (the
inseminator in this example) created conditions that did not mimic
on-farm operations.
Conduct of on-farm research is a constant balancing act between implementing
principles of scientific inquiry and maintaining the characteristics of commercial
production.2 Often, constraints in facility
design, economics, and labor availability force
one to compromise some of the principles of scientific inquiry. The investigator needs
to judge whether these compromises will generate unreliable conclusions.
Willingly commit labor and financial resources
Properly conducted on-farm research requires time to allot animals to
treatments, impose treatments, collect data, and
summarize data. When feasible, one person or small group of employees may be
assigned primary responsibility for imposing treatments and collecting data. Fully
employed members of the labor force in a commercialproduction unit cannot be
expected to perform their regular duties and take on the additional duties required
to conduct a research project. This challenge may be addressed by increasing the size
of the labor pool or by relieving some workers of lower priority duties during the
period of the experiment. Either option has associated costs.
Pay attention to details
A properly designed experiment with a detailed protocol must be implemented
without taking shortcuts or cutting corners. Deviating from the designed protocol
introduces variables into the experiment that were not anticipated by, and may be
unknown to, the investigators. Sometimes, conditions created by external forces
such as disease, inclement weather, or unanticipated animal responses dictate a change
in the protocol. A clear and honest discussion of the required changes and the reason
for the changes among barn staff and investigators is necessary to ensure that the
integrity of the experiment is maintained.
Enhancing success of on-farm trials
Developing a concisely written, detailed protocol
The protocol is the "official" set of
instructions for conducting the experiment. Protocols are just as critical to the success of a
detailed drug approval trial18 as they are to
an investigation of an extensive production practice in the third
world.1 The protocol may be the only source of
information about conduct of the experiment when
the investigator is not present or available to answer questions. Consequently, all
important aspects of the experiment need to be described in the protocol. A protocol
should include objectives, description of
treatments, method of treatment allocation, type of
data to be collected and frequency of collection, procedure for analysis of data, and
contact information for the investigator. Collect only data pertinent to the experiment's
objectives.1 Avoid the temptation to collect
too much data, which may cloud the objective of the experiment and strain the patience
of the barn staff. While detail is important to ensure proper execution of the
experiment, most barn workers will not read a
lengthy, intricate document. Therefore, focus on covering all the important points in a
concise, user-friendly format when writing protocols.
All personnel involved in the experiment should sign the final protocol indicating
that they have read and understand the methodology of the experiment. This is best
done after the researcher(s) and the barn personnel meet to thoroughly discuss the
protocol. Personnel who sign the final protocol
are more likely to be conscientious about implementing it and can be held accountable
for their actions or inactions.
Impose all treatments during same time period
Statistically valid comparisons among treatments can best be made if all
treatments are imposed during the same period of time. Some investigators impose a
treatment on the entire herd, then use a pre-treatment period as the control. This
approach confounds the treatment with time. One cannot determine whether a
biological response observed after the treatment
was applied is associated with the treatment or some other factor(s) that
coincidently changed between the pre-treatment and treatment periods. For example, any
improvement in sow performance observed after a new feed additive was included
in the diet could be associated with the feed additive, a greater proportion of third
to fifth parity sows, a new farrowing house manager, or any other factor that
changed concurrently with introduction of the new feed additive.
Ensure that workers are supportive
The workers responsible for imposing treatments and collecting data must see
the value of conducting the experiment. There is widespread agreement among
researchers that if on-farm research is to be
successful, producers and barn staff must embrace
the project.1,2,8,9 The investigator usually
cannot be on site every day, so primary responsibility for carrying out the protocol
rests with the barn workers. If they do not see value in the extra work required to
conduct an experiment, they are unlikely to do a good job implementing the protocol.
Imposing an experiment on a farm and work force that has not "bought into" the
idea usually is a recipe for failure. The best candidates for on-farm research are
farms where the entire work force continually strives to improve the farm's
production and is attentive to details. These
workers view an experiment as a route to improvement. During the design phase of the
experiment, a dialogue with the farm staff often uncovers useful, more
worker-friendly ways of conducting the trial. This dialogue and use of the workers'
suggestions, when feasible, will help gain the support of the workers for the
experiment. Researchers should be sure to share progress and results with the work force
to keep them connected to the research effort.
Monitor data collection regularly
The investigator or a trusted technician with research training must be at the
farm on a regular basis to monitor data
collection.1,18 The frequency of these visits
depends on the nature of the data being collected and the abilities of the workers.
Barn staff on commercial farms generally have limited experience conducting
experiments, because they focus on management practices to improve productivity.
Therefore, they may spontaneously impose new management practices to improve
production without understanding the effects of these practices on the experiment.
For instance, production workers may not understand the importance of an
experimental unit. In a lactation feeding trial, sow and litter is often the
experimental unit. If workers decide to remove the
partition between adjacent farrowing crates in the last 2 or 3 days of lactation, hoping
to lessen stress at weaning, the integrity of the experimental unit is lost for litter
weaning weight. This may be a very reasonable practice in commercial production, but it
may have huge negative effects on an experiment.
Check data integrity
Investigators must check the integrity of the data reported to them throughout
the experiment to identify problems and implement corrective measures as
required. If one waits until the end of the experiment, it may be too late to correct
the problem. Data integrity checks give everyone increased confidence in the end
result of the experiment.
One way to conduct a check of data integrity is to record the same information
in two different ways. For instance, record daily sow feed intake at the farrowing
crate and total weight of lactation feed delivered to the unit. Theoretically, the sum of
feed offered to sows in the farrowing crates should equal the total amount of feed
delivered to the unit during the same period. Of course, one needs to account for
feed wastage and carryover feed in bins. Another example would be to record
number of pigs born alive per litter, pigs
transferred in and out of litters, pig deaths, and
numberof pigs weaned. Number of pigs born alive minus pig deaths plus or
minus pig transfers should equal number of pigs weaned per litter.
Blind treatments to barn staff
Barn staff may knowingly or unknowingly have a preference for a particular
treatment and should be blinded to the treatments being
imposed.18 As a result of their bias, they may think they see a biological
response to treatments when really there is no response. This is particularly
important if the workers are asked to record
subjective data such as scouring scores, condition scores, or other similar measurements.
Barn staff and coordinators should not be permitted to look at or summarize
performance of animals while the experiment is underway, as this involvement may bias
the experiment. Assigning nondescript labels to all treatments eliminates any bias the
workers may harbor. Blinding treatments is not always possible. For example, a feed
additive based on herbal supplements may have a characteristic aroma that betrays any
attempt to blind the treatment.
Observe pigs
On regular visits to the farm, observe the pigs' condition and behavior. Are they
responding to treatments as expected? If not, why? This is important, because the
investigator cannot rely solely on the data
collected to determine whether the experiment was
a success. We recently conducted a sow lactation trial on a large commercial farm.
The barn records showed that sows in mid-lactation were consuming in excess of 9 kg
of feed daily, but sows became excited and agitated when we entered the farrowing
room, behaving similarly to limit-fed gestating sows. We learned that the amount of
feed the workers thought they placed in the feeder was significantly less than the
amount recorded on the feed sheet, because workers used a volumetric approach to measure feed.
This problem was not apparent without observation of the sows.
Beware of volumetric feed measures
Most commercial farms are not equipped with tools to capture weight of feed
offered to individual sows or pens of pigs. The costs of equipment or labor or both
to weigh feed for individual sows or pens of pigs are high and are not practical in
commercial settings, so investigators must rely on volumetric measures. Volumetric
feed drops or feed scoops must be calibrated regularly to ensure that a 5-lb drop
or scoop truly offers 5 lb. Changes in season, bulk density of feed, workers, and
other factors may influence the amount of feed provided to pigs. If decisions are
being made on the basis of feed efficiency or cost of feeding, then one should invest in
systems that provide gravimetric measures of feed intake.
Be aware of evolution in the production system
The primary reason for conducting on-farm research is to determine the efficacy
of treatments under commercial conditions. However, commercial conditions
change over time. Health status, genetic base, parity structure, pig flow, herd manager,
labor force, or facilities may change during the course of the experiment. Some
changes simply happen, with little opportunity for intervention by owners or managers.
Other changes are imposed in response to economic forces. Investigators usually
have little ability to influence these changes. Consequently, they must be aware of
the changes and record them so that they can be considered when the results of the
experiment are interpreted. Changes in a production system should be recorded in
a daily log of events. This log should include changes that affect the entire unit
(eg, changes in genetics, vaccinations, and feed supplier) and changes that directly
affect the experiment (eg, power outage in a specific room, localized disease outbreak,
mix-up with treatment labels).
Keep treatments simple
On-farm experiments should include a minimum number of treatments that
are simple to implement.1,2,9 A small
number of treatments, usually a control and an experimental treatment, allow the
maximal number of replications per treatment within the number of animals available
for the experiment. Treatments that are easy to implement are more likely to be
imposed willingly and accurately by the barn workers. If the treatments are not
imposed properly, resulting data is meaningless.
Consult a statistician before the experiment starts
A statistician or other professional knowledgeable in experimental design and
analysis must be consulted while the experiment is being designed to ensure that a valid
statistical analysis of the data collected can be
completed.14,19 Aaron and
Hays11 suggested that a consulting statistician
with training or interest in swine production would be most likely to provide useful
advice. Existing layout of feed bins and lines or pig flow or penning arrangements
may prevent the ideal allotment of animals to treatment. Often, a statistician can
help design an allotment scheme that creates minimal disruption of the production
unit while maintaining the ability to make valid comparisons at the end of the
experiment. Statistical analysis of data after the
experiment is designed and completed cannot overcome a poor experimental
design. Consulting statisticians or researchers knowledgeable in experimental design
are available at every land-grant university in the United States. Investigators should
contact the swine specialist in the extension service of their state's land-grant
university for help in identifying a statistician.
Use proper statistical procedures to analyze data
A statistician should be consulted for analysis of the
data.18 Preferably, the same statistician should be consulted during
the design and analysis portions of the experiment. A fact sheet is available to help
investigators conduct a simple, statistically
valid analysis of an experiment with two
treatments.12 Simply calculating the
average litter size weaned by the control and treated sows or the overall average
daily gain of control and treated pigs for comparison will not provide valid
conclusions. A formal statistical analysis will provide
the investigator with confidence that the observed differences were true biological
differences and not simply due to random chance. The statistical analysis may
also identify differences among treatments that were not apparent in a simple
comparison of overall averages.
Evaluate performance using more than one response criterion
Researchers should collect data concurrently on a selected group of related
variables. For instance, collecting information on weight gain, feed intake, and feed
efficiency is helpful in determining whether a statistically significant response is
biologically significant. A statistically
significant improvement in daily weight gain
without an improvement in feed intake or feed efficiency should cast the biological
significance of improved weight gain in doubt. In contrast, improved weight gain
coincident with increased feed intake gives the
investigator increased confidence that the response is real.
Implications
- If conducted properly, on-farm research provides valuable
information on the efficacy of new technologies in commercial production systems.
- Improperly conducted experiments are misleading and may
encourage producers to implement management practices that do not generate
an economic return or may even be detrimental to biological production.
- Retrospective analysis of data may identify associations among
variables of interest but provides no evidence for a causal relationship between
one or more manipulated variables and a production response.
- Communication with barn workers through concise protocols
and carefully designed data collection procedures is crucial to conducting
a successful on-farm experiment.
- Advice of a statistician or
professional who is knowledgeable in experimental design and analysis is invaluable
in designing and conducting an on-farm experiment that will generate
valid, meaningful conclusions.
Acknowledgements
This publication has been supported in part by the Minnesota Agricultural
Experiment Station, St Paul, Minnesota.
References - refereed
1. Hildebrand PE, Russell JT. Adaptability
Analysis: A Method for the Design, Analysis and
Interpretation of On-Farm Research-Extension. Ames, Iowa:
Iowa State University Press; 1996:164.
5. Polson DD, Marsh WE, Dial
GD. Population-based problem solving in swine herds.
Swine Health Prod. 1998;6:267-272.
6. DeVries A. Statistical process control charts
applied to dairy herd reproduction [PhD thesis]. St
Paul, Minnesota: University of Minnesota; 2001:4-19.
8. Edwards-Jones G. Should we engage in farmer-participatory research in the UK?
Outlook Agric. 2001;30:129-136.
9. Pervaiz A, Knipscheer HC. Conducting
On-Farm Animal Research: Procedures and Economic
Analysis. Morrilton, Arkansas: Winrock International
Institute for Agricultural Development and
International Development Research Centre; 1989.
10. Sumberg J, Okali C. Farmers' Experiments:
Creating Local Knowledge. Boulder, Colorado:
Lynne Rienner Publishers; 1997.
11. Aaron DK, Hays VW. Statistical techniques
for the design and analysis of swine nutrition
experiments. In: Lewis AJ, Southern LL, eds. Swine
Nutrition. 2nd ed. Boca Raton, Florida: CRC Press
LLC; 2001:881-901.
13. Steel RGD, Torrie JH. Principles and
Procedures of Statistics: A Biometrical
Approach. New York, New York: McGraw-Hill Book Company; 1980.
14. Gill JL. Design and Analysis of
Experiments. Vol 1. Ames, Iowa: Iowa State University Press; 1978.
15. Berndtson WE. A simple, rapid and reliable method for selecting or assessing the number
of replicates for animal experiments. J Anim
Sci. 1991;69:67-76.
16. UCLA Department of Statistics. Power
calculator. Available at:
http://calculators.stat.ucla.edu/powercalc/. Accessed June 16, 2003.
17. Brant, R. Power/sample size calculator.
Available at:
http://www.health.ucalgary.ca/~rollin/stats/ssize/n2.html. Accessed June 16, 2003.
18. United States Department of Health and Human Services. Guidance for Industry #85:
Good Clinical Practice. Food and Drug
Administration Center for Veterinary Medicine; 2001. Available
at:
http://www.fda.gov/cvm/guidance/guide85.pdf.
Accessed June 2, 2003.
19. United States Department of Health and Human Services. Target Animal Safety Guidelines
for New Animal Drugs, Guideline 33. Food and Drug Administration Center for Veterinary
Medicine; 1989. Available at:
http://www.fda.gov/cvm/guidance/guideline33.html. Accessed June 2, 2003.
20. Carter SD, Hill GM, Mahan DC, Nelssen JL, Richert BT, Shurson GC. Effects of dietary
valine concentration on lactational performance of
sows nursing large litters. J Anim Sci.
2000;78:2879-2884.
21. Johnston LJ, Pettigrew JE, Rust JW. Response
of maternal-line sows to dietary protein
concentration during lactation. J Anim Sci. 1993;71:2151-2156.
22. Cromwell GL, Hall DD, Clawson AJ, Combs GE, Knabe DA, Maxwell CV, Noland PR, Orr
DE Jr, Prince TJ. Effects of additional feed during
late gestation on reproductive performance of sows:
A cooperative study. J Anim Sci. 1989;67:3-14.
23. Knabe DA, Brendemuhl JH, Chiba LI, Dove CR. Supplemental lysine for sows nursing
large litters. J Anim Sci. 1996:74:1635-1640.
24. Touchette KJ, Allee GL, Newcomb MD, Boyd RD. The lysine requirement of lactating
primiparous sows. J Anim Sci. 1998;76:1091-1097.
25. Koketsu Y, Dial GD, Pettigrew JE, Marsh WE, King VL. Characterization of feed intake
patterns during lactation in commercial swine herds.
J Anim Sci. 1996;74:1202-1210.
26. Leibbrandt VD, Johnston LJ, Shurson GC, Crenshaw JD, Libal GW, Arthur RD. Effect
of nipple drinker water flow rate and season on
performance of lactating swine. J Anim Sci. 2001;79:2770-2775.
27. Yang H, Pettigrew JE, Johnston LJ, Shurson GC, Walker RD. Lactational and subsequent
reproductive responses of lactating sows to dietary
lysine (protein) concentration. J Anim Sci.
2000;78:348-357.
28. Johnston LJ, Ellis M, Libal GW, Mayrose VB, Weldon WC, NCR-89 Committee on Swine
Management. Effect of room temperature and dietary amino acid concentration on performance of
lactating sows. J Anim Sci. 1999;77:1638-1644.
29. Hill GM, Mahan DC, Carter SD, Cromwell GL, Ewan RC, Harrold RL, Lewis AJ, Miller
PS, Shurson GC, Veum TL. Effect of pharmacological concentrations of zinc oxide with or without
the inclusion of an antibacterial agent on nursery
pig performance. J Anim Sci. 2001;79:934-941.
30. Brumm MC, Ellis M, Johnston LJ, Rozeboom DW, Zimmerman DR, NCR-89 Committee
on Swine Management. Interaction of swine nursery and grow-finish space allocations on performance.
J Anim Sci. 2001;79:1967-1972.
31. Owen KQ, Nelssen JL, Goodband RD, Tokach MD, Friesen KG. Effect of dietary L-carnitine
on growth performance and body composition in nursery and growing-finishing pigs.
J Anim Sci. 2001;79:1509-1515.
32. Wolter BF, Ellis M, Curtis SE, Parr EN,
Webel DM. Feeder location did not affect performance
of weanling pigs in large groups. J Anim
Sci. 2000;78:2784-2789.
33. Wolter BF, Ellis M, Curtis SE, Parr EN,
Webel DM. Group size and floor-space allowance can
affect weanling-pig performance. J Anim
Sci. 2000;78:2062-2067.
34. Mavromichalis I, Hancock JD, Senne BW, Gugle TL, Kennedy GA, Hines RH, Wyatt
CL. Enzyme supplementation and particle size of
wheat in diets for nursery and finishing pigs. J Anim
Sci. 2000;78:3086-3095.
35. Brumm MC, NCR-89 Committee on Management of Swine. Effect of space allowance on
barrow performance to 136 kilograms body weight.
J Anim Sci. 1996;74:745-749.
36. Randolph JH, Cromwell GL, Stahly TS,
Kratzer DD. Effects of group size and space allowance
on performance and behavior of swine. J Anim
Sci. 1981;53:922-927.
37. Wolter BF, Ellis M, Curtis SE, Augspurger
NR, Hamilton DN, Parr EN, Webel DM. Effect of group size on pig performance in a
wean-to-finish production system. J Anim
Sci. 2001;79:1067-1073.
References - non refereed
2. Anderson MD, Lockeretz W. On-Farm
Research Techniques: Report on a Workshop. 1991. Institute
for Alternative Agriculture Occasional Paper Series No. 1.
3. Barban J. Statistical Process Control. Proc
AD Leman Swine Conf Workshop. St Paul,
Minnesota. 2001;1-11.
4. Dial GD, FitzSimmons M, BeVier GW, Wiseman BS. Systems approaches for improving
the productivity of the breeding herd. Proc AD
Leman Swine Conf. St Paul, Minnesota. 1994;21:84-93.
7. Deen J. Using statistical process control in
swine production. Proc North Amer Vet Conf. 1997;11:987-988.
12. Reese DE, Stroup WW. Conducting Pig Feed Trials on the
Farm. 1992. University of Nebraska Cooperative Extension Bulletin EC 92-270-B.
|
|